Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DW869_11930 | Not Available | Positive | 2911825 - 2915973 | 157559.0 |
| dna repair protein radc | DW869_11935 | Not Available | Negative | 2916094 - 2916783 | 25617.0 |
| glycosyltransferase | DW869_11940 | Not Available | Negative | 2916857 - 2917846 | 37604.6 |
| elongation factor p | DW869_11945 | Not Available | Negative | 2917948 - 2918514 | 21126.5 |
| 50s ribosomal protein l34 | DW869_11950 | Not Available | Positive | 2918717 - 2918872 | 6019.34 |
| anaerobic sulfatase-maturation protein | DW869_11955 | Not Available | Negative | 2919051 - 2920286 | 48023.5 |
| hypothetical protein | DW869_11965 | Not Available | Negative | 2921081 - 2921389 | 12080.6 |
| hypothetical protein | DW869_11970 | Not Available | Negative | 2921332 - 2922060 | 28523.1 |
| hypothetical protein | DW869_11975 | Not Available | Positive | 2922086 - 2922529 | 17109.1 |
| duf4491 family protein | DW869_11980 | Not Available | Negative | 2922729 - 2923043 | 12155.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

