Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | DW869_11675 | Not Available | Negative | 2827008 - 2827472 | 17401.2 |
| atp-dependent dna helicase recg | DW869_11680 | Not Available | Negative | 2827693 - 2829789 | 79778.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW869_11685 | Not Available | Negative | 2829791 - 2830450 | 24344.4 |
| dj-1 family protein | DW869_11690 | Not Available | Negative | 2830447 - 2830998 | 19256.6 |
| tonb family protein | DW869_11695 | Not Available | Negative | 2831002 - 2831895 | 31458.6 |
| biopolymer transporter exbd | DW869_11700 | Not Available | Negative | 2831905 - 2832324 | 16032.8 |
| mota/tolq/exbb proton channel family protein | DW869_11705 | Not Available | Negative | 2832331 - 2833044 | 25739.8 |
| pyridoxine 5'-phosphate synthase | DW869_11710 | Not Available | Negative | 2833044 - 2833760 | 26433.6 |
| nad kinase | DW869_11715 | Not Available | Positive | 2833879 - 2834751 | 32172.3 |
| acyloxyacyl hydrolase | DW869_11720 | Not Available | Positive | 2834923 - 2836233 | 49681.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

