Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_11565 | Not Available | Positive | 2804567 - 2805028 | 17150.6 |
| hypothetical protein | DW869_11570 | Not Available | Positive | 2805059 - 2809291 | 158098.0 |
| hypothetical protein | DW869_11575 | Not Available | Positive | 2809311 - 2809631 | 11747.3 |
| hypothetical protein | DW869_11580 | Not Available | Positive | 2809635 - 2810534 | 30522.2 |
| hypothetical protein | DW869_11585 | Not Available | Positive | 2810548 - 2811984 | 52388.6 |
| rna-dependent dna polymerase | DW869_11590 | Not Available | Positive | 2812472 - 2813815 | 52256.1 |
| hypothetical protein | DW869_11595 | Not Available | Positive | 2813829 - 2814239 | 15560.9 |
| hypothetical protein | DW869_11600 | Not Available | Positive | 2814240 - 2814422 | 6660.28 |
| dna adenine methylase | DW869_11605 | Not Available | Positive | 2814422 - 2815249 | 32030.2 |
| hypothetical protein | DW869_11615 | Not Available | Negative | 2815629 - 2816138 | 19776.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

