Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | DW869_11515 | Not Available | Negative | 2795414 - 2795866 | 17677.0 |
| hypothetical protein | DW869_11520 | Not Available | Positive | 2796039 - 2797025 | 36441.4 |
| hypothetical protein | DW869_11525 | Not Available | Positive | 2797053 - 2797964 | 32918.0 |
| lysozyme | DW869_11530 | Not Available | Positive | 2797969 - 2798433 | 17339.7 |
| hypothetical protein | DW869_11535 | Not Available | Positive | 2798446 - 2799015 | 21000.4 |
| hypothetical protein | DW869_11540 | Not Available | Positive | 2798987 - 2799382 | 14721.6 |
| hypothetical protein | DW869_11545 | Not Available | Positive | 2799389 - 2800126 | 25796.9 |
| hypothetical protein | DW869_11550 | Not Available | Positive | 2800130 - 2800609 | 18187.8 |
| hypothetical protein | DW869_11555 | Not Available | Positive | 2800648 - 2800848 | 7521.98 |
| hypothetical protein | DW869_11560 | Not Available | Positive | 2800872 - 2804570 | 135764.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

