Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_11465 | Not Available | Positive | 2787779 - 2788201 | 16040.5 |
| duf3164 family protein | DW869_11470 | Not Available | Positive | 2788233 - 2788901 | 25220.3 |
| hypothetical protein | DW869_11475 | Not Available | Positive | 2788914 - 2789198 | 11308.6 |
| hypothetical protein | DW869_11480 | Not Available | Positive | 2789182 - 2789424 | 8704.56 |
| hypothetical protein | DW869_11485 | Not Available | Positive | 2789532 - 2789879 | 13910.5 |
| hypothetical protein | DW869_11490 | Not Available | Negative | 2789876 - 2790307 | 16080.4 |
| hypothetical protein | DW869_11495 | Not Available | Negative | 2790310 - 2790786 | 17572.8 |
| duf935 family protein | DW869_11500 | Not Available | Negative | 2790949 - 2793474 | 95609.5 |
| duf1320 domain-containing protein | DW869_11505 | Not Available | Negative | 2793478 - 2793903 | 16089.0 |
| hypothetical protein | DW869_11510 | Not Available | Negative | 2793906 - 2795426 | 58820.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

