Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_11260 | Not Available | Negative | 2743385 - 2744086 | 26539.9 |
| hypothetical protein | DW869_11265 | Not Available | Negative | 2744034 - 2744582 | 20757.9 |
| glycosyltransferase | DW869_11270 | Not Available | Negative | 2744584 - 2745537 | 36346.1 |
| duf4199 domain-containing protein | DW869_11275 | Not Available | Negative | 2745541 - 2746074 | 20508.6 |
| hypothetical protein | DW869_11280 | Not Available | Negative | 2746081 - 2746329 | 9849.11 |
| Trna-thr | Not Available | Not Available | Positive | 2746334 - 2746407 | Not Available |
| atp-dependent dna helicase recq | DW869_11290 | Not Available | Positive | 2746518 - 2748935 | 91680.0 |
| hypothetical protein | DW869_11295 | Not Available | Negative | 2749038 - 2749244 | 8068.73 |
| hypothetical protein | DW869_11300 | Not Available | Negative | 2749284 - 2749484 | 7352.06 |
| aaa family atpase | DW869_11305 | Not Available | Positive | 2750132 - 2751700 | 60578.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

