Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_11000 | Not Available | Positive | 2694151 - 2694588 | 16275.1 |
| duf4886 domain-containing protein | DW869_11005 | Not Available | Positive | 2694648 - 2697290 | 98622.8 |
| duf2971 domain-containing protein | DW869_11010 | Not Available | Positive | 2697704 - 2698414 | 27940.4 |
| sgnh/gdsl hydrolase family protein | DW869_11015 | Not Available | Negative | 2698658 - 2700862 | 83164.1 |
| hypothetical protein | DW869_11020 | Not Available | Positive | 2701198 - 2701674 | 18055.4 |
| peptidase m15 | DW869_11025 | Not Available | Positive | 2701764 - 2702162 | 15227.1 |
| hypothetical protein | DW869_11035 | Not Available | Positive | 2702445 - 2702699 | 9366.28 |
| hypothetical protein | DW869_11040 | Not Available | Positive | 2703474 - 2703683 | 7584.95 |
| hypothetical protein | DW869_11045 | Not Available | Negative | 2703675 - 2704850 | 45192.9 |
| Trna-ala | Not Available | Not Available | Positive | 2704984 - 2705057 | Not Available |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

