Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_10945 | Not Available | Positive | 2680199 - 2681347 | 43460.0 |
| susc/raga family tonb-linked outer membrane protein | DW869_10950 | Not Available | Positive | 2681377 - 2684580 | 119716.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_10955 | Not Available | Positive | 2684595 - 2686151 | 58782.0 |
| atp-dependent clp protease proteolytic subunit | DW869_10960 | Not Available | Positive | 2686380 - 2687510 | 42026.9 |
| hypothetical protein | DW869_10965 | Not Available | Positive | 2687525 - 2688592 | 39911.9 |
| hypothetical protein | DW869_10970 | Not Available | Positive | 2688607 - 2689215 | 21868.8 |
| hypothetical protein | DW869_10975 | Not Available | Positive | 2689218 - 2689796 | 21923.0 |
| hypothetical protein | DW869_10980 | Not Available | Positive | 2689830 - 2691017 | 45018.7 |
| hypothetical protein | DW869_10985 | Not Available | Positive | 2691040 - 2691498 | 17370.0 |
| hypothetical protein | DW869_10995 | Not Available | Positive | 2693806 - 2694144 | 11799.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

