Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vrr-nuc domain-containing protein | DW869_10835 | Not Available | Positive | 2659703 - 2660065 | 13929.9 |
| hypothetical protein | DW869_10845 | Not Available | Positive | 2660864 - 2661517 | 24371.1 |
| hypothetical protein | DW869_10850 | Not Available | Positive | 2661549 - 2661968 | 15779.5 |
| hypothetical protein | DW869_10855 | Not Available | Positive | 2661971 - 2663320 | 53086.4 |
| hypothetical protein | DW869_10860 | Not Available | Positive | 2663317 - 2663634 | 12242.9 |
| hypothetical protein | DW869_10865 | Not Available | Positive | 2663647 - 2663838 | 7106.81 |
| integrase | DW869_10870 | Not Available | Positive | 2663963 - 2665069 | 43457.4 |
| sam-dependent dna methyltransferase | DW869_10875 | Not Available | Positive | 2665026 - 2666018 | 36932.0 |
| hypothetical protein | DW869_10880 | Not Available | Positive | 2666036 - 2666335 | 11402.5 |
| hypothetical protein | DW869_10890 | Not Available | Positive | 2668050 - 2668640 | 22583.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

