Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i pullulanase | DW869_10735 | Not Available | Negative | 2644516 - 2646510 | 74625.4 |
| crossover junction endodeoxyribonuclease ruvc | DW869_10740 | Not Available | Negative | 2646515 - 2647084 | 21117.3 |
| duf4286 family protein | DW869_10745 | Not Available | Negative | 2647081 - 2647386 | 11925.3 |
| hypothetical protein | DW869_10750 | Not Available | Negative | 2647927 - 2648172 | 9360.5 |
| hypothetical protein | DW869_10755 | Not Available | Negative | 2648313 - 2648555 | 9001.03 |
| restriction endonuclease | DW869_10760 | Not Available | Negative | 2648973 - 2650064 | 42237.3 |
| s24 family peptidase | DW869_10765 | Not Available | Negative | 2650109 - 2650804 | 25647.0 |
| hypothetical protein | DW869_10770 | Not Available | Negative | 2650988 - 2651395 | 14697.4 |
| hypothetical protein | DW869_10775 | Not Available | Negative | 2651702 - 2652094 | 14967.1 |
| hypothetical protein | DW869_10780 | Not Available | Negative | 2652091 - 2652432 | 13155.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

