Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 215385 - 215458 | Not Available |
| hybrid sensor histidine kinase/response regulator | DW869_00900 | Not Available | Positive | 215598 - 219818 | 162680.0 |
| alpha-n-acetylglucosaminidase | DW869_00905 | Not Available | Positive | 219901 - 222165 | 87249.0 |
| duf1624 domain-containing protein | DW869_00910 | Not Available | Positive | 222173 - 223291 | 41615.9 |
| tonb-dependent receptor | DW869_00915 | Not Available | Positive | 223367 - 226390 | 111915.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_00920 | Not Available | Positive | 226411 - 228051 | 61732.4 |
| glycerophosphodiester phosphodiesterase | DW869_00925 | Not Available | Positive | 228125 - 228937 | 30989.0 |
| glycoside hydrolase family 92 protein | DW869_00930 | Not Available | Positive | 228957 - 231290 | 88768.2 |
| glycoside hydrolase family 28 protein | DW869_00935 | Not Available | Positive | 231316 - 232728 | 52158.1 |
| glycoside hydrolase family 92 protein | DW869_00940 | Not Available | Positive | 232731 - 235010 | 86221.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

