Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM38-19
Accession NumberQSHD00000000.1
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_10210 | Not Available | + | 2503743 - 2504090 | 12500.0 |
| hypothetical protein | DW869_10215 | Not Available | + | 2504087 - 2504662 | 20567.4 |
| hypothetical protein | DW869_10220 | Not Available | + | 2504666 - 2505157 | 18742.3 |
| Hypothetical protein | DW869_10225 | Not Available | + | 2505196 - 2505396 | 7346.62 |
| Putative tape measure domain protein | DW869_10230 | Not Available | + | 2505397 - 2509788 | 162886.0 |
| glpgli family protein | DW869_00010 | Not Available | - | 555 - 2261 | 63526.1 |
| dna-binding protein | DW869_00015 | Not Available | - | 2340 - 2978 | 24089.6 |
| hypothetical protein | DW869_00020 | Not Available | + | 2980 - 3186 | 7958.76 |
| virulence-associated protein e | DW869_00025 | Not Available | + | 3292 - 4443 | 45224.5 |
| susc/raga family tonb-linked outer membrane protein | DW869_00030 | Not Available | + | 4779 - 8189 | 124912.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
