Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW869_10085 | Not Available | Positive | 2487233 - 2488102 | 32763.1 |
| hypothetical protein | DW869_10090 | Not Available | Positive | 2488099 - 2488497 | 15246.3 |
| hypothetical protein | DW869_10095 | Not Available | Positive | 2488500 - 2489177 | 26124.2 |
| hypothetical protein | DW869_10100 | Not Available | Positive | 2489174 - 2489410 | 8595.21 |
| hypothetical protein | DW869_10105 | Not Available | Positive | 2489414 - 2490319 | 34880.0 |
| hypothetical protein | DW869_10110 | Not Available | Positive | 2490339 - 2490644 | 11097.3 |
| hypothetical protein | DW869_10115 | Not Available | Positive | 2490665 - 2491177 | 20093.5 |
| hypothetical protein | DW869_10120 | Not Available | Positive | 2491210 - 2491407 | 7235.0 |
| hypothetical protein | DW869_10125 | Not Available | Positive | 2491591 - 2492034 | 17207.7 |
| duf3164 family protein | DW869_10130 | Not Available | Positive | 2492056 - 2492706 | 25799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

