Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | DW869_10030 | Not Available | Negative | 2477951 - 2480098 | 80167.6 |
| aspartate-semialdehyde dehydrogenase | DW869_10035 | Not Available | Positive | 2480264 - 2481274 | 37295.9 |
| hypothetical protein | DW869_10045 | Not Available | Positive | 2483253 - 2483465 | 7893.87 |
| hypothetical protein | DW869_10050 | Not Available | Positive | 2483533 - 2483754 | 8822.87 |
| xre family transcriptional regulator | DW869_10055 | Not Available | Negative | 2483865 - 2484284 | 15767.9 |
| hypothetical protein | DW869_10060 | Not Available | Positive | 2484420 - 2484611 | 7470.04 |
| Trna-undet | Not Available | Not Available | Positive | 2484622 - 2484707 | Not Available |
| arsr family transcriptional regulator | DW869_10070 | Not Available | Positive | 2484731 - 2484931 | 7270.89 |
| hypothetical protein | DW869_10075 | Not Available | Positive | 2484921 - 2485142 | 8704.04 |
| kinase | DW869_10080 | Not Available | Positive | 2485158 - 2487197 | 79238.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

