Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DW869_09825 | Not Available | Positive | 2440235 - 2440456 | 8807.68 |
| duf4406 domain-containing protein | DW869_09830 | Not Available | Positive | 2440456 - 2440923 | 17687.1 |
| hypothetical protein | DW869_09835 | Not Available | Positive | 2440942 - 2441175 | 8993.88 |
| hypothetical protein | DW869_09840 | Not Available | Positive | 2441177 - 2441599 | 16525.9 |
| hypothetical protein | DW869_09845 | Not Available | Positive | 2441606 - 2441791 | 7140.02 |
| hypothetical protein | DW869_09850 | Not Available | Positive | 2441778 - 2441975 | 7552.23 |
| duf3164 family protein | DW869_09855 | Not Available | Positive | 2441994 - 2442656 | 26025.8 |
| transposase | DW869_09860 | Not Available | Positive | 2442767 - 2443036 | 10777.2 |
| hypothetical protein | DW869_09865 | Not Available | Negative | 2443019 - 2443480 | 17456.4 |
| hypothetical protein | DW869_09870 | Not Available | Negative | 2443485 - 2444114 | 24522.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

