Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_09775 | Not Available | Positive | 2433662 - 2433844 | 6803.6 |
| lexa family transcriptional regulator | DW869_09780 | Not Available | Negative | 2434031 - 2434735 | 26250.4 |
| dna-directed rna polymerase subunit beta | DW869_09785 | Not Available | Positive | 2434851 - 2435066 | 7960.58 |
| hypothetical protein | DW869_09790 | Not Available | Positive | 2435088 - 2435480 | 15251.2 |
| hypothetical protein | DW869_09795 | Not Available | Positive | 2435626 - 2435892 | 9878.74 |
| hypothetical protein | DW869_09800 | Not Available | Positive | 2435954 - 2436334 | 14625.5 |
| hypothetical protein | DW869_09805 | Not Available | Positive | 2436346 - 2438451 | 81024.0 |
| atp-binding protein | DW869_09810 | Not Available | Positive | 2438488 - 2439369 | 32770.4 |
| hypothetical protein | DW869_09815 | Not Available | Positive | 2439366 - 2439623 | 9723.77 |
| hypothetical protein | DW869_09820 | Not Available | Positive | 2439592 - 2440254 | 25328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

