Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW869_09720 | Not Available | Positive | 2420521 - 2421240 | 26742.3 |
| abc transporter permease | DW869_09725 | Not Available | Positive | 2421250 - 2422506 | 46624.1 |
| abc transporter permease | DW869_09730 | Not Available | Positive | 2422511 - 2423752 | 45551.9 |
| efflux rnd transporter periplasmic adaptor subunit | DW869_09735 | Not Available | Positive | 2423826 - 2424920 | 40037.4 |
| tolc family protein | DW869_09740 | Not Available | Positive | 2424933 - 2426249 | 49375.2 |
| duf4369 domain-containing protein | DW869_09745 | Not Available | Negative | 2426533 - 2429208 | 101139.0 |
| hypothetical protein | DW869_09750 | Not Available | Negative | 2429317 - 2430270 | 38702.7 |
| gntr family transcriptional regulator | DW869_09755 | Not Available | Negative | 2430394 - 2431227 | 31856.5 |
| iron-containing alcohol dehydrogenase | DW869_09760 | Not Available | Positive | 2431304 - 2432698 | 51593.0 |
| hypothetical protein | DW869_09770 | Not Available | Positive | 2433380 - 2433622 | 8616.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

