Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase p family protein | DW869_00845 | Not Available | Positive | 203911 - 205692 | 66941.2 |
| gamma carbonic anhydrase family protein | DW869_00850 | Not Available | Positive | 205702 - 206226 | 18518.4 |
| porin family protein | DW869_00855 | Not Available | Positive | 206272 - 206763 | 18002.5 |
| gnat family n-acetyltransferase | DW869_00860 | Not Available | Positive | 206877 - 207833 | 36797.0 |
| dna-binding response regulator | DW869_00865 | Not Available | Negative | 207884 - 208585 | 26528.4 |
| sensor histidine kinase | DW869_00870 | Not Available | Negative | 208610 - 209995 | 53356.8 |
| hypothetical protein | DW869_00875 | Not Available | Positive | 210118 - 212415 | 87711.8 |
| pdz domain-containing protein | DW869_00880 | Not Available | Negative | 212481 - 214175 | 63106.7 |
| adenosine kinase | DW869_00885 | Not Available | Negative | 214219 - 215205 | 35266.9 |
| Trna-asn | Not Available | Not Available | Positive | 215286 - 215359 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

