Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | DW869_09455 | Not Available | Positive | 2338576 - 2338998 | 16326.8 |
| hypothetical protein | DW869_09460 | Not Available | Positive | 2339006 - 2340781 | 67917.0 |
| atp-dependent clp protease atp-binding subunit | DW869_09465 | Not Available | Positive | 2340778 - 2343216 | 90769.6 |
| hypothetical protein | DW869_09470 | Not Available | Positive | 2343201 - 2344136 | 35920.5 |
| hypothetical protein | DW869_09475 | Not Available | Positive | 2344150 - 2345028 | 33990.1 |
| hypothetical protein | DW869_09480 | Not Available | Positive | 2345032 - 2346180 | 43365.7 |
| hypothetical protein | DW869_09485 | Not Available | Positive | 2346201 - 2346698 | 19326.7 |
| hypothetical protein | DW869_09490 | Not Available | Positive | 2346695 - 2347141 | 17559.2 |
| pkd domain-containing protein | DW869_09495 | Not Available | Positive | 2347152 - 2348093 | 35932.8 |
| hypothetical protein | DW869_09500 | Not Available | Positive | 2348090 - 2350438 | 89891.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

