Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_09400 | Not Available | Negative | 2329435 - 2329794 | 13881.3 |
| atp-binding protein | DW869_09405 | Not Available | Positive | 2329893 - 2331212 | 51227.8 |
| hypothetical protein | DW869_09410 | Not Available | Negative | 2331283 - 2331537 | 9467.61 |
| para family protein | DW869_09415 | Not Available | Negative | 2331544 - 2332299 | 27463.9 |
| single-stranded dna-binding protein | DW869_09420 | Not Available | Negative | 2332538 - 2332951 | 15135.8 |
| tetr/acrr family transcriptional regulator | DW869_09425 | Not Available | Negative | 2333734 - 2334510 | 30174.4 |
| hypothetical protein | DW869_09435 | Not Available | Negative | 2334955 - 2335413 | 18171.7 |
| hypothetical protein | DW869_09440 | Not Available | Negative | 2335426 - 2336145 | 26789.3 |
| type vi secretion system contractile sheath protein tssc | DW869_09445 | Not Available | Negative | 2336549 - 2337928 | 52717.4 |
| hypothetical protein | DW869_09450 | Not Available | Negative | 2337941 - 2338408 | 17242.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

