Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | DW869_09345 | Not Available | Positive | 2321054 - 2321899 | 32100.7 |
| hypothetical protein | DW869_09350 | Not Available | Positive | 2321896 - 2322408 | 19078.2 |
| duf1566 domain-containing protein | DW869_09355 | Not Available | Positive | 2322430 - 2323086 | 23979.3 |
| hypothetical protein | DW869_09360 | Not Available | Positive | 2323100 - 2323837 | 28174.2 |
| type iv secretory system conjugative dna transfer family protein | DW869_09365 | Not Available | Positive | 2323841 - 2326027 | 83199.4 |
| hypothetical protein | DW869_09370 | Not Available | Negative | 2326145 - 2326501 | 13268.0 |
| hypothetical protein | DW869_09380 | Not Available | Negative | 2326815 - 2327096 | 11010.3 |
| hypothetical protein | DW869_09385 | Not Available | Positive | 2327169 - 2327420 | 9848.86 |
| hypothetical protein | DW869_09390 | Not Available | Positive | 2327386 - 2327544 | 5618.92 |
| parb/repb/spo0j family partition protein | DW869_09395 | Not Available | Negative | 2327599 - 2329344 | 66904.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

