Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | DW869_09295 | Not Available | Positive | 2314211 - 2314981 | 29635.7 |
| duf5045 domain-containing protein | DW869_09300 | Not Available | Positive | 2315050 - 2315820 | 28557.6 |
| hypothetical protein | DW869_09305 | Not Available | Positive | 2315835 - 2316968 | 42015.2 |
| hypothetical protein | DW869_09310 | Not Available | Positive | 2316968 - 2317387 | 17258.9 |
| conjugative transposon protein trak | DW869_09315 | Not Available | Positive | 2317394 - 2318008 | 23609.8 |
| hypothetical protein | DW869_09320 | Not Available | Positive | 2318021 - 2318395 | 14566.6 |
| adenine methyltransferase | DW869_09325 | Not Available | Positive | 2318406 - 2318888 | 18418.2 |
| conjugative transposon protein tram | DW869_09330 | Not Available | Positive | 2318872 - 2320044 | 43145.1 |
| hypothetical protein | DW869_09335 | Not Available | Positive | 2320057 - 2320392 | 13159.7 |
| trna (adenine-n(6)-)-methyltransferase | DW869_09340 | Not Available | Positive | 2320442 - 2321041 | 23247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

