Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DW869_09245 | Not Available | Positive | 2303429 - 2304535 | 41865.3 |
| dna primase | DW869_09250 | Not Available | Positive | 2304643 - 2305530 | 33989.9 |
| hypothetical protein | DW869_09255 | Not Available | Positive | 2305765 - 2306217 | 16788.7 |
| duf4134 domain-containing protein | DW869_09260 | Not Available | Positive | 2306153 - 2306542 | 14220.8 |
| duf4134 domain-containing protein | DW869_09265 | Not Available | Positive | 2306606 - 2306983 | 13424.2 |
| duf4133 domain-containing protein | DW869_09270 | Not Available | Positive | 2306995 - 2307288 | 10591.3 |
| duf87 domain-containing protein | DW869_09275 | Not Available | Positive | 2307399 - 2310110 | 104155.0 |
| hypothetical protein | DW869_09280 | Not Available | Positive | 2310110 - 2310748 | 25431.6 |
| hypothetical protein | DW869_09285 | Not Available | Positive | 2310753 - 2313284 | 95956.4 |
| hypothetical protein | DW869_09290 | Not Available | Positive | 2313281 - 2314006 | 27950.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

