Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_09090 | Not Available | Negative | 2249985 - 2251175 | 45188.1 |
| rida family protein | DW869_09095 | Not Available | Negative | 2251338 - 2251715 | 13256.1 |
| transcription termination factor rho | DW869_09100 | Not Available | Positive | 2252143 - 2254152 | 74254.4 |
| right-handed parallel beta-helix repeat-containing protein | DW869_09105 | Not Available | Positive | 2254265 - 2256256 | 74829.6 |
| alpha-xylosidase | DW869_09110 | Not Available | Positive | 2256267 - 2258513 | 86401.5 |
| cobalamin-binding protein | DW869_09115 | Not Available | Positive | 2258519 - 2260321 | 66635.9 |
| na+/glucose cotransporter | DW869_09120 | Not Available | Positive | 2260355 - 2261926 | 57724.5 |
| methionine synthase | DW869_09130 | Not Available | Negative | 2262218 - 2262904 | 25457.4 |
| methylcobamide--com methyltransferase | DW869_09135 | Not Available | Negative | 2262897 - 2263907 | 36532.3 |
| histidine-type phosphatase | DW869_09140 | Not Available | Negative | 2264057 - 2265337 | 48942.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

