Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_09040 | Not Available | Negative | 2237775 - 2238440 | 26013.6 |
| polysaccharide pyruvyl transferase family protein | DW869_09045 | Not Available | Negative | 2238538 - 2239428 | 33883.5 |
| lipopolysaccharide biosynthesis protein | DW869_09050 | Not Available | Negative | 2239428 - 2240879 | 54642.9 |
| hypothetical protein | DW869_09055 | Not Available | Negative | 2241119 - 2243083 | 76198.8 |
| transcriptional regulator | DW869_09060 | Not Available | Negative | 2243302 - 2244135 | 32273.7 |
| site-specific integrase | DW869_09065 | Not Available | Negative | 2244754 - 2245956 | 46810.8 |
| abc transporter atp-binding protein | DW869_09070 | Not Available | Negative | 2246040 - 2247905 | 72134.0 |
| duf3805 domain-containing protein | DW869_09075 | Not Available | Negative | 2247913 - 2248746 | 31633.2 |
| lactoylglutathione lyase | DW869_09080 | Not Available | Negative | 2248789 - 2249166 | 14724.3 |
| mbl fold metallo-hydrolase | DW869_09085 | Not Available | Negative | 2249184 - 2249975 | 30418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

