Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW869_08935 | Not Available | Negative | 2219989 - 2220459 | 18469.4 |
| recombinase family protein | DW869_08940 | Not Available | Negative | 2220772 - 2221005 | 8757.8 |
| hypothetical protein | DW869_08945 | Not Available | Positive | 2221831 - 2222055 | 8319.09 |
| energy transducer tonb | DW869_08955 | Not Available | Positive | 2223237 - 2223968 | 27575.9 |
| hypothetical protein | DW869_08960 | Not Available | Negative | 2224362 - 2225171 | 31234.6 |
| nad(p)-dependent oxidoreductase | DW869_08965 | Not Available | Negative | 2225168 - 2226181 | 37990.0 |
| hypothetical protein | DW869_08970 | Not Available | Negative | 2226202 - 2226837 | 24694.3 |
| hypothetical protein | DW869_08975 | Not Available | Negative | 2226834 - 2227430 | 22665.9 |
| glycosyltransferase | DW869_08980 | Not Available | Negative | 2227480 - 2228178 | 27272.7 |
| glycosyltransferase | DW869_08985 | Not Available | Negative | 2228175 - 2228984 | 31573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

