Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translational gtpase typa | DW869_08675 | Not Available | Negative | 2158335 - 2160137 | 67346.3 |
| hybrid sensor histidine kinase/response regulator | DW869_08680 | Not Available | Negative | 2160204 - 2164325 | 157414.0 |
| duf5033 domain-containing protein | DW869_08685 | Not Available | Negative | 2164678 - 2165283 | 22809.1 |
| duf3575 domain-containing protein | DW869_08690 | Not Available | Positive | 2165722 - 2166291 | 21771.4 |
| duf3868 domain-containing protein | DW869_08695 | Not Available | Positive | 2166304 - 2167764 | 54310.8 |
| hypothetical protein | DW869_08700 | Not Available | Positive | 2167951 - 2168253 | 11858.8 |
| hypothetical protein | DW869_08705 | Not Available | Positive | 2168588 - 2170294 | 63401.9 |
| hypothetical protein | DW869_08710 | Not Available | Positive | 2170379 - 2171425 | 39307.3 |
| hypothetical protein | DW869_08715 | Not Available | Positive | 2171449 - 2172552 | 40335.8 |
| duf4906 domain-containing protein | DW869_08720 | Not Available | Positive | 2172589 - 2174703 | 78846.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

