Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s7 | DW869_00745 | Not Available | Negative | 187465 - 187941 | 18204.1 |
| 30s ribosomal protein s12 | DW869_00750 | Not Available | Negative | 188090 - 188503 | 14994.4 |
| duf3467 domain-containing protein | DW869_00755 | Not Available | Negative | 188692 - 189033 | 12561.0 |
| dna-directed rna polymerase subunit beta' | DW869_00760 | Not Available | Negative | 189242 - 193528 | 158848.0 |
| dna-directed rna polymerase subunit beta | DW869_00765 | Not Available | Negative | 193567 - 197379 | 142493.0 |
| 50s ribosomal protein l7/l12 | DW869_00770 | Not Available | Negative | 197482 - 197856 | 12654.2 |
| 50s ribosomal protein l10 | DW869_00775 | Not Available | Negative | 197903 - 198421 | 18678.8 |
| 50s ribosomal protein l1 | DW869_00780 | Not Available | Negative | 198437 - 199135 | 24935.6 |
| 50s ribosomal protein l11 | DW869_00785 | Not Available | Negative | 199151 - 199594 | 15797.5 |
| transcription termination/antitermination factor nusg | DW869_00790 | Not Available | Negative | 199655 - 200197 | 20140.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

