Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kila-n domain-containing protein | DW869_08470 | Not Available | Negative | 2098516 - 2099370 | 33282.9 |
| 3-oxoacyl-acp synthase | DW869_08475 | Not Available | Negative | 2099484 - 2100437 | 35493.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DW869_08480 | Not Available | Negative | 2100441 - 2101631 | 42078.1 |
| acyl carrier protein | DW869_08485 | Not Available | Negative | 2101628 - 2101885 | 9574.45 |
| beta-acp synthase | DW869_08490 | Not Available | Negative | 2101891 - 2103621 | 63708.2 |
| acyl-coa thioesterase | DW869_08495 | Not Available | Negative | 2103606 - 2104049 | 17322.7 |
| hydroxymyristoyl-acp dehydratase | DW869_08500 | Not Available | Negative | 2104046 - 2104483 | 16448.2 |
| methyltransferase domain-containing protein | DW869_08505 | Not Available | Negative | 2104480 - 2105550 | 40634.7 |
| acyltransferase | DW869_08510 | Not Available | Negative | 2105564 - 2106448 | 34490.0 |
| acyl carrier protein | DW869_08515 | Not Available | Negative | 2106448 - 2106699 | 9584.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

