Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DW869_08410 | Not Available | Negative | 2080202 - 2084188 | 150412.0 |
| hypothetical protein | DW869_08415 | Not Available | Negative | 2084329 - 2087685 | 126559.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_08420 | Not Available | Negative | 2087825 - 2089444 | 61301.8 |
| susc/raga family tonb-linked outer membrane protein | DW869_08425 | Not Available | Negative | 2089471 - 2092190 | 102306.0 |
| aaa family atpase | DW869_08430 | Not Available | Negative | 2092265 - 2093020 | 28940.3 |
| hypothetical protein | DW869_08445 | Not Available | Negative | 2095102 - 2095386 | 9654.48 |
| hydroxymyristoyl-acp dehydratase | DW869_08450 | Not Available | Negative | 2095495 - 2095875 | 14330.6 |
| hypothetical protein | DW869_08455 | Not Available | Negative | 2095877 - 2096419 | 20765.7 |
| outer membrane lipoprotein carrier protein lola | DW869_08460 | Not Available | Negative | 2096394 - 2097029 | 24793.4 |
| polysaccharide deacetylase family protein | DW869_08465 | Not Available | Negative | 2097773 - 2098465 | 26608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

