Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_08260 | Not Available | Positive | 2044231 - 2045025 | 30456.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DW869_08265 | Not Available | Negative | 2045149 - 2045595 | 16503.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DW869_08270 | Not Available | Negative | 2045614 - 2046669 | 40182.2 |
| trna pseudouridine(55) synthase trub | DW869_08275 | Not Available | Negative | 2046681 - 2047388 | 26653.3 |
| undecaprenyl-diphosphatase | DW869_08280 | Not Available | Negative | 2047393 - 2048193 | 28480.0 |
| duf3098 domain-containing protein | DW869_08285 | Not Available | Negative | 2048231 - 2048476 | 9145.44 |
| abc transporter permease | DW869_08290 | Not Available | Negative | 2048489 - 2049358 | 32622.6 |
| class i sam-dependent methyltransferase | DW869_08295 | Not Available | Negative | 2049361 - 2050227 | 33271.9 |
| pspc domain-containing protein | DW869_08300 | Not Available | Positive | 2050395 - 2050631 | 9155.18 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DW869_08305 | Not Available | Negative | 2050641 - 2051042 | 15118.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

