Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase family protein | DW869_08110 | Not Available | Positive | 2009698 - 2010609 | 33003.2 |
| prolipoprotein diacylglyceryl transferase | DW869_08115 | Not Available | Positive | 2010606 - 2011427 | 31459.1 |
| chloramphenicol acetyltransferase | DW869_08120 | Not Available | Positive | 2011428 - 2012084 | 25304.1 |
| porin family protein | DW869_08125 | Not Available | Negative | 2012320 - 2013018 | 25718.4 |
| hypothetical protein | DW869_08130 | Not Available | Negative | 2013327 - 2013572 | 9250.33 |
| tetratricopeptide repeat protein | DW869_08135 | Not Available | Negative | 2013689 - 2015344 | 64330.6 |
| hypothetical protein | DW869_08140 | Not Available | Negative | 2015453 - 2017120 | 64171.6 |
| port family protein | DW869_08145 | Not Available | Negative | 2017163 - 2017750 | 21981.3 |
| hypothetical protein | DW869_08150 | Not Available | Positive | 2017803 - 2017994 | 6947.7 |
| glycoside hydrolase | DW869_08155 | Not Available | Negative | 2017957 - 2019936 | 75351.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

