Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine adenylyltransferase | DW869_07960 | Not Available | Negative | 1974463 - 1974918 | 17350.0 |
| type iia dna topoisomerase subunit b | DW869_07965 | Not Available | Negative | 1974936 - 1976813 | 71021.8 |
| n-acetyltransferase | DW869_07970 | Not Available | Negative | 1976844 - 1977980 | 43785.1 |
| sodium:calcium antiporter | DW869_07975 | Not Available | Negative | 1978055 - 1979017 | 33528.8 |
| acid phosphatase | DW869_07980 | Not Available | Negative | 1979081 - 1980052 | 37238.9 |
| tonb-dependent receptor | DW869_07985 | Not Available | Negative | 1980063 - 1982831 | 104197.0 |
| hypothetical protein | DW869_07990 | Not Available | Positive | 1983113 - 1983298 | 7353.07 |
| hypothetical protein | DW869_07995 | Not Available | Negative | 1983389 - 1983868 | 18255.3 |
| hypothetical protein | DW869_08000 | Not Available | Negative | 1983952 - 1986975 | 109986.0 |
| arac family transcriptional regulator | DW869_08005 | Not Available | Negative | 1987020 - 1987514 | 19177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

