Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5119 domain-containing protein | DW869_07910 | Not Available | Positive | 1963194 - 1964189 | 36253.9 |
| fimbrillin family protein | DW869_07915 | Not Available | Positive | 1964238 - 1965221 | 35284.9 |
| arac family transcriptional regulator | DW869_07920 | Not Available | Positive | 1965720 - 1966580 | 33227.9 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DW869_07925 | Not Available | Negative | 1966645 - 1967400 | 27308.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DW869_07930 | Not Available | Negative | 1967421 - 1969379 | 72651.5 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DW869_07935 | Not Available | Negative | 1969414 - 1970100 | 25487.5 |
| hypothetical protein | DW869_07940 | Not Available | Negative | 1970546 - 1970962 | 15438.3 |
| hypothetical protein | DW869_07945 | Not Available | Negative | 1971014 - 1971739 | 27149.4 |
| phosphatase pap2 family protein | DW869_07950 | Not Available | Positive | 1972144 - 1972755 | 22003.9 |
| s41 family peptidase | DW869_07955 | Not Available | Negative | 1972859 - 1974460 | 60787.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

