Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | DW869_07805 | Not Available | Negative | 1935129 - 1935728 | 22102.6 |
| hypothetical protein | DW869_07810 | Not Available | Negative | 1935743 - 1936432 | 25224.2 |
| cobaltochelatase subunit cobn | DW869_07815 | Not Available | Negative | 1936439 - 1940914 | 166097.0 |
| tonb-dependent receptor | DW869_07820 | Not Available | Negative | 1940961 - 1943117 | 81336.9 |
| hypothetical protein | DW869_07825 | Not Available | Negative | 1943131 - 1943793 | 24838.4 |
| hypothetical protein | DW869_07830 | Not Available | Negative | 1943795 - 1944262 | 16027.4 |
| hypothetical protein | DW869_07835 | Not Available | Positive | 1944496 - 1944729 | 9045.06 |
| helix-turn-helix domain-containing protein | DW869_07840 | Not Available | Positive | 1945075 - 1945983 | 35494.1 |
| hypothetical protein | DW869_07845 | Not Available | Positive | 1946504 - 1949302 | 104420.0 |
| ompa family protein | DW869_07850 | Not Available | Positive | 1949307 - 1950497 | 44989.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

