Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | DW869_07755 | Not Available | Negative | 1920316 - 1921569 | 44034.9 |
| fecr family protein | DW869_07760 | Not Available | Positive | 1921793 - 1922719 | 35749.9 |
| susc/raga family tonb-linked outer membrane protein | DW869_07765 | Not Available | Positive | 1922871 - 1926287 | 125545.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW869_07770 | Not Available | Positive | 1926306 - 1927919 | 60295.0 |
| dicarboxylate/amino acid:cation symporter | DW869_07775 | Not Available | Positive | 1928155 - 1929309 | 41320.2 |
| hypothetical protein | DW869_07780 | Not Available | Positive | 1929445 - 1930935 | 55805.3 |
| hypothetical protein | DW869_07785 | Not Available | Positive | 1930947 - 1931507 | 21343.8 |
| ahpc/tsa family protein | DW869_07790 | Not Available | Negative | 1931607 - 1932602 | 37139.8 |
| duf4091 domain-containing protein | DW869_07795 | Not Available | Positive | 1932736 - 1934484 | 66472.4 |
| duf2149 domain-containing protein | DW869_07800 | Not Available | Negative | 1934798 - 1935127 | 12459.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

