Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s5 | DW869_00645 | Not Available | Negative | 176621 - 177139 | 17941.0 |
| 50s ribosomal protein l18 | DW869_00650 | Not Available | Negative | 177143 - 177484 | 12645.5 |
| 50s ribosomal protein l6 | DW869_00655 | Not Available | Negative | 177506 - 178075 | 20910.5 |
| 30s ribosomal protein s8 | DW869_00660 | Not Available | Negative | 178090 - 178485 | 14565.0 |
| 30s ribosomal protein s14 | DW869_00665 | Not Available | Negative | 178543 - 178842 | 11077.7 |
| 50s ribosomal protein l5 | DW869_00670 | Not Available | Negative | 178849 - 179406 | 20860.8 |
| 50s ribosomal protein l24 | DW869_00675 | Not Available | Negative | 179406 - 179729 | 11658.2 |
| 50s ribosomal protein l14 | DW869_00680 | Not Available | Negative | 179750 - 180115 | 13058.1 |
| 30s ribosomal protein s17 | DW869_00685 | Not Available | Negative | 180118 - 180375 | 9981.21 |
| 50s ribosomal protein l29 | DW869_00690 | Not Available | Negative | 180387 - 180581 | 7453.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

