Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | DW869_07400 | Not Available | Negative | 1825627 - 1825863 | 8817.46 |
| n-acetyltransferase | DW869_07405 | Not Available | Negative | 1825866 - 1826666 | 31821.7 |
| amino acid adenylation domain-containing protein | DW869_07410 | Not Available | Negative | 1826703 - 1828214 | 57257.4 |
| ketoacyl-acp synthase iii | DW869_07415 | Not Available | Negative | 1828216 - 1829193 | 35909.1 |
| acyl carrier protein | DW869_07420 | Not Available | Negative | 1829190 - 1829423 | 8794.04 |
| 4fe-4s dicluster domain-containing protein | DW869_07425 | Not Available | Negative | 1829437 - 1831260 | 68642.5 |
| transcriptional regulator | DW869_07430 | Not Available | Negative | 1831636 - 1832466 | 31555.8 |
| tonb family protein | DW869_07435 | Not Available | Negative | 1833053 - 1833739 | 25600.7 |
| transcription-repair coupling factor | DW869_07440 | Not Available | Negative | 1834004 - 1837369 | 127080.0 |
| duf418 domain-containing protein | DW869_07445 | Not Available | Positive | 1837477 - 1838661 | 45074.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

