Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DW869_07295 | Not Available | Positive | 1798898 - 1800112 | 44935.4 |
| pyridoxal phosphate-dependent aminotransferase | DW869_07300 | Not Available | Positive | 1800238 - 1801431 | 43067.4 |
| 4fe-4s dicluster domain-containing protein | DW869_07305 | Not Available | Negative | 1801609 - 1801776 | 5717.65 |
| beta-n-acetylglucosaminidase | DW869_07310 | Not Available | Negative | 1801894 - 1804872 | 111508.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DW869_07315 | Not Available | Negative | 1804918 - 1805760 | 31272.2 |
| 5'-nucleotidase | DW869_07320 | Not Available | Negative | 1805772 - 1806551 | 27882.5 |
| 50s ribosomal protein l19 | DW869_07325 | Not Available | Positive | 1806749 - 1807102 | 13130.2 |
| hypothetical protein | DW869_07330 | Not Available | Positive | 1807257 - 1807475 | 7867.05 |
| hybrid sensor histidine kinase/response regulator | DW869_07335 | Not Available | Negative | 1807557 - 1811843 | 162839.0 |
| l-rhamnose mutarotase | DW869_07340 | Not Available | Negative | 1811924 - 1812238 | 12242.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

