Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m56 family peptidase | DW869_07145 | Not Available | Negative | 1744887 - 1746773 | 70605.0 |
| blai/meci/copy family transcriptional regulator | DW869_07150 | Not Available | Negative | 1746807 - 1747169 | 14012.8 |
| glucuronyl hydrolase | DW869_07155 | Not Available | Negative | 1747380 - 1748603 | 46579.4 |
| glycoside hydrolase | DW869_07160 | Not Available | Negative | 1748621 - 1750270 | 61781.2 |
| alpha-glucosidase | DW869_07165 | Not Available | Negative | 1750424 - 1752361 | 73670.1 |
| hypothetical protein | DW869_07170 | Not Available | Negative | 1752503 - 1755139 | 98794.7 |
| serine hydrolase | DW869_07175 | Not Available | Negative | 1755146 - 1756231 | 39744.6 |
| glycoside hydrolase family 127 protein | DW869_07180 | Not Available | Negative | 1756309 - 1758231 | 73147.1 |
| glycoside hydrolase | DW869_07185 | Not Available | Negative | 1758358 - 1759743 | 52288.7 |
| hypothetical protein | DW869_07190 | Not Available | Negative | 1759839 - 1761452 | 61099.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

