Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_07045 | Not Available | Positive | 1717254 - 1717532 | 10779.0 |
| peptide chain release factor 1 | DW869_07050 | Not Available | Positive | 1717516 - 1718631 | 42032.6 |
| orotidine 5'-phosphate decarboxylase | DW869_07055 | Not Available | Positive | 1718668 - 1719486 | 30601.6 |
| hd domain-containing protein | DW869_07060 | Not Available | Positive | 1719575 - 1720810 | 47193.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DW869_07065 | Not Available | Positive | 1720943 - 1721983 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DW869_07070 | Not Available | Positive | 1721989 - 1723374 | 51127.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW869_07075 | Not Available | Positive | 1723391 - 1724158 | 27740.6 |
| hypothetical protein | DW869_07080 | Not Available | Positive | 1724221 - 1724784 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW869_07085 | Not Available | Positive | 1724836 - 1725738 | 35069.2 |
| alpha-l-fucosidase | DW869_07090 | Not Available | Positive | 1725747 - 1727786 | 76809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

