Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | DW869_06995 | Not Available | Positive | 1705514 - 1706545 | 39589.6 |
| beta-n-acetylhexosaminidase | DW869_07000 | Not Available | Positive | 1706602 - 1708908 | 85868.1 |
| hypothetical protein | DW869_07005 | Not Available | Negative | 1709018 - 1709509 | 17873.6 |
| hypothetical protein | DW869_07010 | Not Available | Negative | 1709528 - 1709749 | 8766.94 |
| carbon starvation protein a | DW869_07015 | Not Available | Negative | 1709736 - 1711166 | 52225.5 |
| s-layer protein | DW869_07020 | Not Available | Positive | 1711245 - 1712924 | 64140.6 |
| hypothetical protein | DW869_07025 | Not Available | Positive | 1713090 - 1713305 | 7955.02 |
| cell filamentation protein fic | DW869_07030 | Not Available | Negative | 1713273 - 1714271 | 39599.1 |
| hypothetical protein | DW869_07035 | Not Available | Negative | 1714274 - 1714867 | 22592.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | DW869_07040 | Not Available | Positive | 1716104 - 1717273 | 42663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

