Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 3 | DW869_06945 | Not Available | Negative | 1687808 - 1689376 | 59982.5 |
| dtdp-4-dehydrorhamnose reductase | DW869_06950 | Not Available | Negative | 1689383 - 1690240 | 31996.1 |
| duf4924 family protein | DW869_06955 | Not Available | Negative | 1690255 - 1690797 | 21340.1 |
| lyse family translocator | DW869_06960 | Not Available | Negative | 1690869 - 1691528 | 24319.7 |
| phosphoribosylformylglycinamidine synthase | DW869_06965 | Not Available | Positive | 1691679 - 1695383 | 137142.0 |
| hybrid sensor histidine kinase/response regulator | DW869_06970 | Not Available | Positive | 1695461 - 1699477 | 154412.0 |
| chromate transporter | DW869_06975 | Not Available | Positive | 1699482 - 1700030 | 20451.8 |
| chromate transporter | DW869_06980 | Not Available | Positive | 1700027 - 1700599 | 21054.4 |
| hypothetical protein | DW869_06985 | Not Available | Negative | 1700886 - 1702385 | 58071.4 |
| excinuclease abc subunit uvra | DW869_06990 | Not Available | Positive | 1702467 - 1705268 | 104876.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

