Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_06895 | Not Available | Positive | 1678649 - 1679185 | 20510.8 |
| site-specific integrase | DW869_06900 | Not Available | Negative | 1679197 - 1680123 | 35609.8 |
| restriction endonuclease subunit s | DW869_06905 | Not Available | Positive | 1680133 - 1681365 | 47043.5 |
| hypothetical protein | DW869_06910 | Not Available | Negative | 1681358 - 1681600 | 9136.23 |
| site-specific integrase | DW869_06915 | Not Available | Positive | 1681868 - 1683103 | 47582.9 |
| hypothetical protein | DW869_06920 | Not Available | Positive | 1683122 - 1683451 | 12529.4 |
| hypothetical protein | DW869_06925 | Not Available | Negative | 1683813 - 1684892 | 40319.9 |
| duf108 domain-containing protein | DW869_06930 | Not Available | Positive | 1685189 - 1685977 | 28134.8 |
| dihydrofolate reductase | DW869_06935 | Not Available | Negative | 1685960 - 1686844 | 32605.2 |
| molecular chaperone djla | DW869_06940 | Not Available | Positive | 1686951 - 1687733 | 29022.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

