Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_06840 | Not Available | Positive | 1668733 - 1669143 | 16150.3 |
| hypothetical protein | DW869_06845 | Not Available | Positive | 1669174 - 1671732 | 96771.5 |
| hypothetical protein | DW869_06850 | Not Available | Positive | 1671729 - 1672451 | 27719.5 |
| site-specific dna-methyltransferase | DW869_06855 | Not Available | Positive | 1672607 - 1673365 | 29164.9 |
| duf5045 domain-containing protein | DW869_06860 | Not Available | Positive | 1673441 - 1674208 | 28462.5 |
| hypothetical protein | DW869_06865 | Not Available | Positive | 1674222 - 1674434 | 7633.93 |
| dna-binding protein | DW869_06870 | Not Available | Positive | 1675045 - 1675377 | 12818.4 |
| hypothetical protein | DW869_06875 | Not Available | Positive | 1675410 - 1675901 | 17776.8 |
| hypothetical protein | DW869_06880 | Not Available | Positive | 1676192 - 1676638 | 16990.4 |
| relaxase | DW869_06890 | Not Available | Positive | 1677366 - 1678625 | 47809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

