Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW869_06785 | Not Available | Positive | 1659452 - 1660582 | 43281.7 |
| hypothetical protein | DW869_06795 | Not Available | Positive | 1660840 - 1661484 | 24069.1 |
| dna-binding protein | DW869_06800 | Not Available | Positive | 1661653 - 1662057 | 15856.3 |
| mobilization protein | DW869_06805 | Not Available | Positive | 1662035 - 1663159 | 42340.5 |
| zf-chc2 and toprim domain-containing protein | DW869_06810 | Not Available | Positive | 1663241 - 1664128 | 33898.5 |
| hypothetical protein | DW869_06815 | Not Available | Positive | 1664370 - 1664819 | 16619.7 |
| duf4134 domain-containing protein | DW869_06820 | Not Available | Positive | 1664821 - 1665147 | 11554.5 |
| duf4134 domain-containing protein | DW869_06825 | Not Available | Positive | 1665222 - 1665587 | 12996.6 |
| duf4133 domain-containing protein | DW869_06830 | Not Available | Positive | 1665600 - 1665896 | 10763.6 |
| duf87 domain-containing protein | DW869_06835 | Not Available | Positive | 1666003 - 1668708 | 104150.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

