Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp dehydrogenase | DW869_06730 | Not Available | Negative | 1647212 - 1648687 | 52760.1 |
| hypothetical protein | DW869_06740 | Not Available | Positive | 1648939 - 1649373 | 17227.5 |
| helicase | DW869_06745 | Not Available | Negative | 1649497 - 1651593 | 80640.3 |
| hypothetical protein | DW869_06750 | Not Available | Negative | 1652350 - 1652787 | 17357.5 |
| hypothetical protein | DW869_06755 | Not Available | Negative | 1653426 - 1653608 | 6895.11 |
| transglutaminase domain-containing protein | DW869_06760 | Not Available | Negative | 1653948 - 1655456 | 57599.3 |
| hypothetical protein | DW869_06765 | Not Available | Negative | 1655468 - 1655944 | 17607.2 |
| peptidase domain-containing abc transporter | DW869_06770 | Not Available | Negative | 1656150 - 1658315 | 81365.3 |
| thioredoxin family protein | DW869_06775 | Not Available | Negative | 1658330 - 1658851 | 20384.5 |
| hypothetical protein | DW869_06780 | Not Available | Negative | 1658836 - 1659078 | 9373.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

