Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylyl-sulfate kinase | DW869_06680 | Not Available | Negative | 1635242 - 1635856 | 22681.6 |
| slc13/dass family transporter | DW869_06685 | Not Available | Negative | 1635886 - 1637439 | 56631.6 |
| 3'(2'),5'-bisphosphate nucleotidase | DW869_06690 | Not Available | Negative | 1637455 - 1638264 | 30250.0 |
| hypothetical protein | DW869_06695 | Not Available | Negative | 1638279 - 1639487 | 45833.1 |
| dna mismatch repair endonuclease mutl | DW869_06700 | Not Available | Negative | 1639716 - 1641584 | 68716.8 |
| hypothetical protein | DW869_06705 | Not Available | Negative | 1641606 - 1641902 | 11737.6 |
| hypothetical protein | DW869_06710 | Not Available | Negative | 1641905 - 1643572 | 63852.4 |
| peptidylprolyl isomerase | DW869_06715 | Not Available | Negative | 1643590 - 1644948 | 52289.8 |
| peptidyl-prolyl cis-trans isomerase | DW869_06720 | Not Available | Negative | 1644953 - 1645825 | 34134.5 |
| peptidylprolyl isomerase | DW869_06725 | Not Available | Negative | 1645862 - 1647199 | 52134.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

