Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan--trna ligase | DW869_06630 | Not Available | Negative | 1620596 - 1621690 | 41366.8 |
| hypothetical protein | DW869_06635 | Not Available | Positive | 1621794 - 1622585 | 29912.6 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DW869_06640 | Not Available | Positive | 1622840 - 1626061 | 119478.0 |
| tonb-dependent receptor | DW869_06645 | Not Available | Negative | 1626127 - 1628931 | 106633.0 |
| tlpa family protein disulfide reductase | DW869_06650 | Not Available | Negative | 1628952 - 1629452 | 19123.4 |
| peroxide stress protein yaaa | DW869_06655 | Not Available | Positive | 1629540 - 1630307 | 29392.5 |
| hypothetical protein | DW869_06660 | Not Available | Positive | 1630414 - 1631613 | 43736.0 |
| sulfotransferase | DW869_06665 | Not Available | Negative | 1631691 - 1632797 | 43290.1 |
| sulfate adenylyltransferase subunit cysn | DW869_06670 | Not Available | Negative | 1632825 - 1634282 | 54506.5 |
| sulfate adenylyltransferase subunit cysd | DW869_06675 | Not Available | Negative | 1634319 - 1635230 | 35794.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

