Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4252 domain-containing protein | DW869_00545 | Not Available | Positive | 163805 - 164299 | 19072.2 |
| rna polymerase sigma factor | DW869_00550 | Not Available | Positive | 164286 - 164798 | 20081.9 |
| hypothetical protein | DW869_00555 | Not Available | Positive | 164785 - 165315 | 20158.2 |
| duf4252 domain-containing protein | DW869_00560 | Not Available | Positive | 165312 - 165770 | 17333.2 |
| hypothetical protein | DW869_00565 | Not Available | Negative | 166025 - 166696 | 23981.6 |
| hypothetical protein | DW869_00570 | Not Available | Negative | 166780 - 167025 | 9614.01 |
| hypothetical protein | DW869_00575 | Not Available | Positive | 167027 - 168826 | 68617.8 |
| hypothetical protein | DW869_00580 | Not Available | Negative | 168921 - 169460 | 19772.7 |
| hypothetical protein | DW869_00585 | Not Available | Negative | 169579 - 170004 | 15788.1 |
| 50s ribosomal protein l17 | DW869_00590 | Not Available | Negative | 170415 - 170903 | 17965.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

